Viewing XML file: NeuroMLFiles/Examples/MorphML/CablesIncluded.xml
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<?xml version="1.0" encoding="UTF-8"?> <morphml xmlns="http://morphml.org/morphml/schema" xmlns:meta="http://morphml.org/metadata/schema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://morphml.org/morphml/schema http://www.neuroml.org/NeuroMLValidator/NeuroMLFiles/Schemata/v1.8.1/Level1/MorphML_v1.8.1.xsd" length_units="micrometer"> <cells> <cell name="CellWithCables"> <meta:notes>Test cell for showing mapping to NEURON/GENESIS when cables/sections are specified (e.g. as in a MorphML file where the segments have been grouped into cables in preparation for mapping to a neuronal simulator)</meta:notes> <meta:properties> <meta:property tag="Neuron type" value="Abstract"/> <!-- Preferred form for property element since v1.7.1 --> </meta:properties> <segments> <!-- Soma segment--> <segment id= "0" name = "SomaSeg" cable = "0"> <proximal x="0" y="0" z="0" diameter="10"/> <distal x="10" y="0" z="0" diameter="10"/> </segment> <!-- Segments in cable 1--> <segment id= "1" name = "DendSeg1" parent = "0" cable = "1"> <proximal x="5" y="0" z="0" diameter="5"/> <distal x="5" y="10" z="0" diameter="5"/> </segment> <segment id= "2" name = "DendSeg2" parent = "1" cable = "1"> <!-- No need for proximal point: taken from distal of parent--> <distal x="5" y="20" z="0" diameter="5"/> </segment> <segment id= "3" name = "DendSeg3" parent = "2" cable = "1"> <distal x="5" y="30" z="0" diameter="5"/> </segment> <!-- Segments in cable 2--> <segment id= "4" name = "DendSeg4" parent = "0" cable = "2"> <proximal x="10" y="0" z="0" diameter="3"/> <!-- Note 3D point same as parent, diam different--> <distal x="10" y="0" z="10" diameter="3"/> </segment> <segment id= "5" name = "DendSeg5" parent = "4" cable = "2"> <distal x="10" y="0" z="20" diameter="3"/> </segment> </segments> <cables> <cable id= "0" name = "SomaSec"> <meta:group>soma_group</meta:group> </cable> <!-- The two dendritic cables are in group dendrite_group --> <cable id= "1" name = "DendSec1" fract_along_parent="0.5"> <meta:group>dendrite_group</meta:group> </cable> <cable id= "2" name = "DendSec2"> <meta:group>dendrite_group</meta:group> </cable> </cables> </cell> </cells> </morphml>